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Recent relevant publications:

Pieroni E, de la Fuente van Bentem S, Mancosu G, Capobianco E, Hirt H, de la Fuente A. (2008) Protein networking: insights into global functional organization of proteomes. Proteomics 4, 799-816.

de la Fuente van Bentem, S., Mentzen, W., de la Fuente, A., and Hirt, H. (2008) Towards functional phosphoproteomics by mapping differential phosphorylation events in signalling networks. Proteomics 8:4453-4465.

Van Bentem, S. and Hirt, H (2009) Tyrosine phosphorylation in plants: more abundant than expected? Trends Plant Sci.14:71-76.

Pitzsche, A. and Hirt, H. (2010) Bioinformatic and systems biology tools to generate testable models of signaling pathways and their targets. Plant Phys. 152:460-9

Pflieger D, Gonnet F, van Bentem S, Hirt H, de la Fuente A (2011) LINKING THE PROTEINS – ELUCIDATION OF PROTEOME-SCALE NETWORKS USING MASS SPECTROMETRY. Mass Spectr. Rev. 30:268-97.

Pflieger, D., Bigeard, J., Hirt, H. (2011) Isolation and characterization of protein complexes by mass spectrometry. Proteomics 9:1824-33.